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Created
May 05, 2025 09:48
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jjk6146
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Updated
May 05, 2025 09:48
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[unknown user]
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Updated
Subject, Language, Description, and 1 more
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May 05, 2025 09:49
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jjk6146
Subject
- Metabolomics, Mass Spectrometry, Chemical Education, Analytical Chemistry, Course Design, Chemometrics, Inquiry-based Learning
Language
Description
- Metabolomics is a highly interdisciplinary field and has undergone rapid advancement in the three decades since its inception. Scientists wishing to incorporate metabolomics in their research approaches must apply knowledge from a variety of disciplines, from analytical chemistry to multivariate statistics. However, educational and training opportunities are lacking, and many available resources are short-term in nature and focused on expanding the skillset of those already familiar with metabolomics principles, potentially overlooking those newer to the discipline. To address this gap, a graduate course was developed to provide a practical, hands-on approach to teach metabolomics concepts and methods. Centered around active-learning modules, supplemented with lectures, seminars, and tutorials, students are guided through all aspects of a metabolomics experiment, from experimental design to data collection, processing, analysis, and inference. Students have responded positively to this learner-centered approach and report a deep understanding of the material and confidence in using metabolomics protocols in future experiments.
Publication Date
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May 05, 2025 09:49
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jjk6146
Acknowledgments
- We are grateful for to the Huck Institutes’ Metabolomics Core Facility Director Dr. Ashley Shay (RRID:SCR_023864), and the Penn State NMR Facility Director Dr. Tapas Mal for their enthusiastic support of the students and course. This work is supported by the USDA National Institute of Food and Agriculture and Hatch Appropriations under Project #PEN04956 and Accession #7006496.
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Added Creator Joshua Kellogg
May 05, 2025 09:49
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jjk6146
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mice.csv
May 05, 2025 09:52
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jjk6146
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Mice Metadata.xlsx
May 05, 2025 09:52
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jjk6146
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Mouse Metabolomics Dataset.zip
May 05, 2025 09:52
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mice.csv
May 05, 2025 09:52
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jjk6146
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Mice Metadata.xlsx
May 05, 2025 09:52
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jjk6146
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Workshop-Statistical Analysis-Sample Student Results.zip
May 05, 2025 10:35
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Mouse Metabolomics Dataset_metadata.xlsx
May 05, 2025 10:35
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jjk6146
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Workshop1-MS Data Processing-Sample Student Results.csv
May 05, 2025 10:35
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Workshop-Statistical Analysis-Sample Student Results.zip
May 05, 2025 10:35
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Workshop2-Statistical Analysis-Sample Student Results.zip
May 05, 2025 10:36
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jjk6146
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Workshop3-Data Annotation-Sample Student Results.tar
May 05, 2025 10:38
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jjk6146
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May 05, 2025 10:41
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jjk6146
Work Title
Practical Metabolomics Course Development
- Practical Metabolomics Course Development Resources
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Software Requirements.docx
May 05, 2025 11:48
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jjk6146
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Metabolomics Data Project.docx
May 05, 2025 12:05
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jjk6146
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Manuscript Presentation Rubric.docx
May 05, 2025 12:05
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jjk6146
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Metabolomics Annotated Bibliography.docx
May 05, 2025 12:05
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jjk6146
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Metabolomics Course_README.txt
May 05, 2025 12:08
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jjk6146
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May 05, 2025 12:09
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jjk6146
License
- https://creativecommons.org/licenses/by-nd/4.0/
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Published
May 05, 2025 12:09
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jjk6146