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Computer Code for Luyi Wo Master's Thesis entitled "Evolution and expression of overlapping genes in Drosophila"

Computer Code for Luyi Wo Master's Thesis. Details are described in the Readme.txt file.

Citation

Schaeffer, Stephen; Wo, Luyi (2024). Computer Code for Luyi Wo Master's Thesis entitled "Evolution and expression of overlapping genes in Drosophila" [Data set]. Scholarsphere. https://doi.org/10.26207/25kt-tj07

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Work Title Computer Code for Luyi Wo Master's Thesis entitled "Evolution and expression of overlapping genes in Drosophila"
Access
Open Access
Creators
  1. Stephen Schaeffer
  2. Luyi Wo
License CC BY 4.0 (Attribution)
Work Type Software Or Program Code
Publication Date October 22, 2024
DOI doi:10.26207/25kt-tj07
Deposited October 22, 2024

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Work History

Version 1
published

  • Created

    October 22, 2024 09:22 by sws4

  • Updated

    October 22, 2024 09:22 by [unknown user]

  • Updated Description, Publication Date Show Changes

    October 22, 2024 09:24 by sws4

    Description
    • Computer Code for Luyi Wo Master's Thesis. Details are described in the Readme.txt file.
    Publication Date
    • 2024-10-22
  • Added Creator Stephen Schaeffer

    October 22, 2024 09:24 by sws4

  • Added Creator Luyi Wo

    October 22, 2024 09:24 by sws4

  • Added embedgene-call-v1.sh

    October 22, 2024 09:24 by sws4

  • Added embedgene-parser-v1.sh

    October 22, 2024 09:24 by sws4

  • Added extragene-call-v1.sh

    October 22, 2024 09:24 by sws4

  • Added extragene-parser-v1.sh

    October 22, 2024 09:24 by sws4

  • Added filesplit.sh

    October 22, 2024 09:24 by sws4

  • Added final-call-v1.sh

    October 22, 2024 09:24 by sws4

  • Added list.sh

    October 22, 2024 09:24 by sws4

  • Added ol-position-detector-v3.sh

    October 22, 2024 09:24 by sws4

  • Added overlap-ratio-r-in.sh

    October 22, 2024 09:24 by sws4

  • Added split-v2.sh

    October 22, 2024 09:24 by sws4

  • Added README.txt

    October 22, 2024 09:24 by sws4

  • Added Figure S1 Pipeline.pdf

    October 22, 2024 09:24 by sws4

  • Added simplify

    October 22, 2024 09:24 by sws4

  • Added cds-ol-detector-v1.pl

    October 22, 2024 09:24 by sws4

  • Added gap.pl

    October 22, 2024 09:24 by sws4

  • Added gene-axt-mapper-v1.pl

    October 22, 2024 09:24 by sws4

  • Added non-ol-control-v2.pl

    October 22, 2024 09:24 by sws4

  • Added ol-detector-v2.pl

    October 22, 2024 09:24 by sws4

  • Added cluster-v1.R

    October 22, 2024 09:24 by sws4

  • Added corstrV5-cb.R

    October 22, 2024 09:24 by sws4

  • Added gene-density-cor.R

    October 22, 2024 09:24 by sws4

  • Added length-distribution.R

    October 22, 2024 09:24 by sws4

  • Added overlap-ratio-v1.R

    October 22, 2024 09:24 by sws4

  • Added phylo-plot-poisson-cb.R

    October 22, 2024 09:24 by sws4

  • Added prol.R

    October 22, 2024 09:24 by sws4

  • Added sankoff.R

    October 22, 2024 09:24 by sws4

  • Added sankoffin-v2.R

    October 22, 2024 09:24 by sws4

  • Added sankoff-v4-cb.R

    October 22, 2024 09:24 by sws4

  • Added sankoff-v6-cb.R

    October 22, 2024 09:24 by sws4

  • Added clean.sh

    October 22, 2024 09:24 by sws4

  • Added cluster-r-in.sh

    October 22, 2024 09:24 by sws4

  • Added data-prepare.sh

    October 22, 2024 09:24 by sws4

  • Updated License Show Changes

    October 22, 2024 09:25 by sws4

    License
    • https://creativecommons.org/licenses/by/4.0/
  • Published

    October 22, 2024 09:25 by sws4

  • Updated

    October 22, 2024 22:04 by [unknown user]

  • Updated Work Title Show Changes

    November 07, 2024 09:18 by avs5190

    Work Title
    • Computer Code for Luyi Wo Master's Thesis entitled "EVOLUTION AND EXPRESSION OF OVERLAPPING GENES IN DROSOPHILA "
    • Computer Code for Luyi Wo Master's Thesis entitled "Evolution and expression of overlapping genes in Drosophila"