Shipley_et_al_JID_Figure_4_v.29_10_genome_alignment.fasta

These are three data files from the manuscript: Shipley, Mackenzie M, Daniel W Renner, Mariliis Ott, David C Bloom, David M Koelle, Christine Johnston, and Moriah L Szpara. “Genome-Wide Surveillance of Genital Herpes Simplex Virus Type 1 from Multiple Anatomic Sites over Time.” The Journal of Infectious Diseases 218, no. 4 (June 18, 2018): 595–605. https://doi.org/10.1093/infdis/jiy216. These three genome alignments were used to generate Figure 2 ("Splitstree" alignment) and Figure 4 ("10 genome" alignments, either original or curated) of this manuscript.